Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGTGCTCTCGCGGCTGCT
..((((((((((..(((..((&))..)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145
GeneSymbolANG
Binding site169,189
Score0.923
Seed1
Au0.324
Energy-22.4
Binding len20
Me-7.103
Phylopstem-1.7306649999999997
Phylopflank-0.8416579062500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure