Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGGTCCATTCTGCATTGTATTTCAGGC
.(((((.((((((((((((...&.)))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145000
GeneSymbolITGAV
Binding site6628,6658
Score0.923
Seed0
Au0.647
Energy-23.2
Binding len20
Me-5.337
Phylopstem0.13753175
Phylopflank0.43420572749999997
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure