Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCAGATGCTGAAGGCAGAGCAGCTGA
...(((((((.((((((((((&))))))))))................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145001
GeneSymbolNEK6
Binding site1407,1441
Score1.0
Seed0
Au0.382
Energy-23.3
Binding len34
Me-9.339
Phylopstem1.4713885
Phylopflank0.7851376250000001
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure