Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTTTTGCTTCAGCTGCT
..(((((((.(((....((((&))))......))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145008
GeneSymbolBTN3A1
Binding site379,401
Score0.846
Seed1
Au0.485
Energy-18.6
Binding len22
Me-8.025
Phylopstem-0.14524787142857148
Phylopflank-0.38247839
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure