Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTCACTATGTTGGCCAGGA
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145009
GeneSymbolBTN3A1
Binding site3813,3835
Score0.846
Seed1
Au0.544
Energy-18.0
Binding len16
Me-8.406
Phylopstem-0.3391714874999999
Phylopflank-0.22768154375000005
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure