Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCACCTGTGGTTGCAGA
((((((((((((.(((.....&))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145009
GeneSymbolBTN3A1
Binding site903,920
Score0.846
Seed1
Au0.441
Energy-18.9
Binding len17
Me-5.227
Phylopstem-1.795069758333333
Phylopflank-0.4287395287500001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure