Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCCAGCTCGCAGCTGTC
..(((((((((((((...(((&)))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145011
GeneSymbolC16orf96
Binding site1491,1512
Score0.923
Seed1
Au0.412
Energy-24.0
Binding len21
Me-5.19
Phylopstem-0.5883216335714286
Phylopflank-1.070125782625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure