Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACGGCTGCAGCTGGGC
.(.(((((((((((((.....&))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145011
GeneSymbolC16orf96
Binding site1980,1996
Score0.885
Seed0
Au0.397
Energy-23.0
Binding len16
Me-5.351
Phylopstem-1.064388923076923
Phylopflank-0.6310700362499997
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end3
PositionCDS
2D Structure