Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATTCATGCACTTCAGGCTTCAGCCAGCAGCACGCAT
.(((.((((((((((.(((.(&.).)))))))).)))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145017
GeneSymbolSLC36A3
Binding site252,292
Score0.846
Seed0
Au0.441
Energy-20.3
Binding len23
Me-8.145
Phylopstem0.5259969454545456
Phylopflank0.2036565612500001
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
Position5UTR
2D Structure