Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCAGCCAGAGACTGCAGA
((((((((..(((((..((((&)))))))))..)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145017
GeneSymbolSLC36A3
Binding site707,728
Score0.923
Seed1
Au0.5
Energy-19.7
Binding len21
Me-6.47
Phylopstem0.30773666666666666
Phylopflank-0.12637131999999998
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure