Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGCAGCAAGCAGCTGGAGG
((.(((((((.(((((..(((&))).)))))..))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145018
GeneSymbolCCDC153
Binding site352,374
Score0.923
Seed0
Au0.426
Energy-22.0
Binding len22
Me-8.32
Phylopstem-0.2258111857142857
Phylopflank0.189113005
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure