Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACACCCGGAGCTGCGGA
((((((((.(((.(((..(((&)))..))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145023
GeneSymbolSCRN2
Binding site672,694
Score0.923
Seed1
Au0.338
Energy-24.8
Binding len22
Me-6.283
Phylopstem3.675300375
Phylopflank2.30296845
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure