Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTCAACCTCAGCTGG
...((((((.(((((.(((.(&).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145026
GeneSymbolPTPRQ
Binding site4331,4349
Score1.0
Seed0
Au0.574
Energy-20.1
Binding len18
Me-7.99
Phylopstem3.098056833333333
Phylopflank2.281034505
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure