Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATACAACATATCTTTTTGAAGTTTCAGCTGCT
..(((((((..((((((((((&))))..)))))).................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145026
GeneSymbolPTPRQ
Binding site932,969
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len37
Me-9.024
Phylopstem3.40093575
Phylopflank3.3719185825
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure