Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTGAAAGAGCTTCATGAGACCTTACAGAGTGTGCCAGA
..(((((((((..(((((....&.)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145053
GeneSymbolEFCAB5
Binding site109,149
Score1.0
Seed1
Au0.529
Energy-21.0
Binding len18
Me-9.593
Phylopstem-0.13823408888888894
Phylopflank0.2872712044999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure