Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGCTGGAGTGCAGTGGCGCAACTGTAGCTCACTGCAGC
((((((((((((((((.....&.))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145053
GeneSymbolEFCAB5
Binding site2617,2659
Score0.923
Seed1
Au0.397
Energy-20.5
Binding len22
Me-3.938
Phylopstem-0.11708319999999998
Phylopflank1.1107661324999998
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure