Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGATGTGGCCCGCAGCCGCAGCCCCAAG
(((..(((((((((((..(((&.))).)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145054
GeneSymbolC2orf81
Binding site1686,1716
Score1.0
Seed0
Au0.265
Energy-25.3
Binding len22
Me-11.089
Phylopstem2.0654334363636364
Phylopflank2.01666391
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure