Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGGGAGCCTTCTCCGCAGCTGA
...(((((((((..(.(((((&.)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145054
GeneSymbolC2orf81
Binding site857,883
Score0.923
Seed0
Au0.397
Energy-23.9
Binding len18
Me-8.894
Phylopstem0.2096716666666666
Phylopflank-0.5039014749999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure