Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATGTGTGTCGGGG
.((((((((((.((((......&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145064
GeneSymbolCASTOR2
Binding site4175,4190
Score0.846
Seed1
Au0.353
Energy-19.2
Binding len15
Me-7.14
Phylopstem-1.6105311
Phylopflank-0.46364352549999993
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure