Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGTGCTAGGA
.(((((((((((..........&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145064
GeneSymbolCASTOR2
Binding site6740,6752
Score0.846
Seed1
Au0.456
Energy-18.0
Binding len12
Me-6.908
Phylopstem0.007569636363636375
Phylopflank-0.32738590249999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure