Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CATCCGCAGTTGCAT
.(((((((((((.((......&)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145064
GeneSymbolCASTOR2
Binding site4548,4563
Score1.0
Seed1
Au0.441
Energy-22.1
Binding len15
Me-5.316
Phylopstem-0.5309344181818182
Phylopflank-0.40293352624999995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure