Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCACCAGCAGTGTTCAGTGCCAGGC
.(((((((((((.(((......&.))).)))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145073
GeneSymbolUSP27X
Binding site923,950
Score0.923
Seed1
Au0.485
Energy-18.0
Binding len20
Me-5.082
Phylopstem2.6327957142857144
Phylopflank4.424434508749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure