Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCGGATTGTAAGGACATTGATTGGACGACATATACCTGTGTGCTAGGA
.(((((((((((..(((.....&.))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145076
GeneSymbolEML4
Binding site2363,2413
Score0.897
Seed1
Au0.559
Energy-18.5
Binding len17
Me-5.939
Phylopstem3.5535826363636365
Phylopflank4.73257760375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure