Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACCGCAGGTCAGG
(((.(.(((((((((.(((((&)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145078
GeneSymbolZNF805
Binding site1603,1623
Score0.846
Seed0
Au0.426
Energy-24.3
Binding len20
Me-9.104
Phylopstem-0.5377451555555556
Phylopflank0.7429671175
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure