Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGGAAGTGGTCGCAGTGTCTGCGACCGGGGCTGCC
..((((((.((((((((....&.)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145079
GeneSymbolCOG6
Binding site78,116
Score0.846
Seed1
Au0.309
Energy-25.8
Binding len17
Me-6.013
Phylopstem1.618562125
Phylopflank0.20429840499999996
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end4
PositionCDS
2D Structure