Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATTGTCAGCCAGGA
.((((((..((((((.......&))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145095
GeneSymbolHHLA1
Binding site2564,2579
Score0.923
Seed1
Au0.559
Energy-16.9
Binding len15
Me-7.396
Phylopstem0.8229235
Phylopflank2.4199394737499995
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end1
Position3UTR
2D Structure