Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGAGCTATGGCAGCTGCTCCTCTCACCCTGGCTATTCAGAGGCTCA
.(((((((.((((((((((((&)))))))).........................))))...))).)).)).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001145095
GeneSymbolHHLA1
Binding site1414,1464
Score0.923
Seed1
Au0.426
Energy-21.8
Binding len50
Me-4.85
Phylopstem-0.18666477837837836
Phylopflank-0.2544606368499999
Longest consecutive pairings8
Position of longest consecutive pairings42
Pairings in 3prime end8
PositionCDS
2D Structure