Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTATGGCAGCTGCT
..((((((((.((.((.....&)).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145095
GeneSymbolHHLA1
Binding site1421,1436
Score0.923
Seed1
Au0.426
Energy-20.0
Binding len15
Me-8.639
Phylopstem-0.20309125000000003
Phylopflank-0.2935308001375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure