Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCACAAGTTTTCTGTAGCTGTT
..(((((((((((((((((((&)))))..)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145095
GeneSymbolHHLA1
Binding site407,434
Score0.846
Seed1
Au0.603
Energy-20.3
Binding len27
Me-4.957
Phylopstem-0.6197063038461538
Phylopflank-0.14067959624999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure