Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCAC
.((((((((((((((((((((&))))))))))).....................)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145103
GeneSymbolSMAD3
Binding site3942,3985
Score0.923
Seed1
Au0.456
Energy-25.6
Binding len43
Me-3.793
Phylopstem-0.05799229761904765
Phylopflank-0.2703799937500001
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure