Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTTGTGCTGAGACTGACCCAAGTGCAGCTAGCAC
.((((((((((((((((((((&))))))))))).....................)))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145104
GeneSymbolSMAD3
Binding site3569,3612
Score0.846
Seed1
Au0.456
Energy-25.6
Binding len43
Me-3.793
Phylopstem-0.09844710952380954
Phylopflank-0.12724888000000004
Longest consecutive pairings11
Position of longest consecutive pairings32
Pairings in 3prime end8
Position3UTR
2D Structure