Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGTGACAACTATAGCAGTTGTAT
.(((((((((((((((..(((&)))....))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145104
GeneSymbolSMAD3
Binding site2091,2117
Score0.923
Seed1
Au0.515
Energy-21.2
Binding len26
Me-3.793
Phylopstem0.015361022222222236
Phylopflank0.3855419325
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure