Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGTGGCCCGGCTGCT
..(((((((.(((((..(((.&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145112
GeneSymbolPATL2
Binding site1199,1217
Score0.846
Seed1
Au0.338
Energy-21.1
Binding len18
Me-6.433
Phylopstem3.9761840000000004
Phylopflank3.40934077
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure