Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCCAGAGATAAAATCCATAGGAGACCAGA
..((((((((((((((((.((.&)))))))))...........))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001367251
GeneSymbolRPGR
Binding site1927,1958
Score0.846
Seed1
Au0.618
Energy-23.6
Binding len31
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure