Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGAACTGGGAGCAGCTGCACGCTGCC
..((((((((((((((.....&.))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145122
GeneSymbolCAPN14
Binding site1925,1954
Score1.0
Seed1
Au0.412
Energy-23.2
Binding len17
Me-4.957
Phylopstem1.3740861333333332
Phylopflank0.94205151
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure