Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCCCAGCCTGCAAT
(((((((((.((..((((((.&)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145123
GeneSymbolPPP1R17
Binding site1359,1378
Score0.878
Seed1
Au0.441
Energy-20.8
Binding len19
Me-7.326
Phylopstem0.3747529
Phylopflank0.0017987255000000008
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure