Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCAGCAGCAAT
((((.((((((((.((.....&)).)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145128
GeneSymbolAK9
Binding site1399,1416
Score0.923
Seed0
Au0.574
Energy-19.7
Binding len17
Me-8.913
Phylopstem0.9222039999999999
Phylopflank2.5211256725
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure