Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCCAGAAATCGGCGTAGGGGGTCAGCCGCAGATCTGCT
..(((((((((((((......&.)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145132
GeneSymbolC5orf52
Binding site212,254
Score0.846
Seed1
Au0.294
Energy-21.1
Binding len17
Me-5.19
Phylopstem0.04941210933333333
Phylopflank-0.076425314375
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure