Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGCTGGTCAGTTGCAT
.(((((((((((((.(((((.&))))).)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145137
GeneSymbolCPT1B
Binding site340,362
Score0.846
Seed1
Au0.382
Energy-23.4
Binding len22
Me-4.529
Phylopstem3.4803979333333337
Phylopflank4.8002449625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure