Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGCTGCAGT
(((((((((((((........&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145138
GeneSymbolRELA
Binding site1394,1408
Score0.923
Seed1
Au0.412
Energy-22.9
Binding len14
Me-5.763
Phylopstem2.3669130307692305
Phylopflank1.4375487725
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure