Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCTTCATCCTCCACCTGCTGCTGCAAG
(((((((.((((.((..(((.&.))).)).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145143
GeneSymbolHTR3D
Binding site35,67
Score0.923
Seed1
Au0.485
Energy-20.7
Binding len21
Me-7.773
Phylopstem-0.1385312857142857
Phylopflank0.8195668539473682
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure