Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCTGGTTATTTTGGCGGCTGTAGTTGTGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145144
GeneSymbolSLC1A5
Binding site1482,1517
Score0.923
Seed1
Au0.471
Energy-20.7
Binding len18
Me-3.938
Phylopstem2.7275589625
Phylopflank5.0114673275
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure