Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCAGTGCTAGGTT
(((((((((....((.((((((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145152
GeneSymbolVPS37A
Binding site4245,4263
Score0.846
Seed1
Au0.706
Energy-16.1
Binding len18
Me-12.874
Phylopstem0.1848250111111112
Phylopflank0.15889373249999997
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure