Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACCAAGAGCGCCTCCTCCTCCGCGGCTGGGT
.(.(((((((((..(..((((&.))))...)..))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145152
GeneSymbolVPS37A
Binding site304,339
Score0.923
Seed0
Au0.279
Energy-22.1
Binding len23
Me-7.73
Phylopstem0.19896022222222223
Phylopflank1.1807633825
Longest consecutive pairings9
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure