Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTCGACTGGGCGGCAGCAGG
((((.((((((((((..((((&))))..)))))..))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001145158
GeneSymbolHBS1L
Binding site1621,1645
Score0.923
Seed0
Au0.471
Energy-22.4
Binding len24
Me-8.29
Phylopstem-0.28273892833333336
Phylopflank-0.08989831525
Longest consecutive pairings5
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure