Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACATCACCGAGCACACCGGCTTCACAGGCACAGTGTATGCCACGGA
.(((((((((((.(((......&.))).))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145159
GeneSymbolINTS9
Binding site357,404
Score0.846
Seed1
Au0.382
Energy-18.9
Binding len18
Me-5.082
Phylopstem-0.4879123
Phylopflank-0.5425978324999999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure