Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCGCCCGCGTGTGCCGGGC
.((((((((((...........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145204
GeneSymbolSHISA9
Binding site513,535
Score1.0
Seed1
Au0.265
Energy-18.7
Binding len12
Me-10.255
Phylopstem1.7362435
Phylopflank2.0231834624999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure