Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGCCTGTAATCCCAACTACTCGAGAGGCTGAGGCAGGA
....(((((((((((((((((&)))))).......................))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001145204
GeneSymbolSHISA9
Binding site3861,3905
Score0.846
Seed0
Au0.471
Energy-24.7
Binding len44
Me-9.547
Phylopstem-0.11139496744186045
Phylopflank-0.062139108750000005
Longest consecutive pairings6
Position of longest consecutive pairings38
Pairings in 3prime end8
Position3UTR
2D Structure