Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACCTGCAGGGGCCGCAAGTTTGACGGACATCGATGTGCCGGGC
.((((((((((.((((......&.)))).).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145252
GeneSymbolCFP
Binding site1128,1173
Score0.846
Seed1
Au0.382
Energy-18.2
Binding len18
Me-7.14
Phylopstem1.9668167272727273
Phylopflank1.4120340237500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure