Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTAGCCAATCAAGTCTCTGTGTGCCTGGA
.((.((((((((..(.((((((&.))))))))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001145260
GeneSymbolNCOA4
Binding site544,577
Score0.923
Seed0
Au0.515
Energy-17.9
Binding len20
Me-9.204
Phylopstem0.49578387499999993
Phylopflank0.8632825075
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure